03/07/2021
Platform Selection
- Contents
- Platforms and Treatment
- Affymetrix
- Limma Raw Data Treatment (Single Channel)
- Illumina Matrix Treatment
| Legend | Name | Description |
|---|---|---|
| A | Datasets groups | Groups of files that can possibly be loaded |
| B | File column | Files to be loaded |
| C | Type | Name of the file format |
| D | Status | Validation status. Click on the symbol to display the legend. |
Affymetrix
| Legend | Name | Description |
|---|---|---|
| A | Background correction | Options:
|
| B | Normalization | Options:
|
| C | Probe match correction | Options:
|
| D | Values presentation | Options:
|
| E | Start Treatment | Starts the statistical treatment of the raw data with the specified parameters |
| Legend | Name | Description |
|---|---|---|
| A | Background correction | Options:
|
| B | Normalization | Options:
|
| C | Summarization | Options:
|
| Legend | Name | Description |
|---|---|---|
| A | Background correction | |
| B | Normalize values | Quantiles method |
| Legend | Name | Description |
|---|---|---|
| A | Normalize values | Quantiles method |
| B | Probe match correction | Options:
|
Limma Raw Data Treatment (Single Channel)
| Legend | Name | Description |
|---|---|---|
| A | Background correction | Options:
|
| B | Normalization | Options:
|
| C | NormExp method | Options:
|
| D | Cyclic lowless method | Options:
|
| E | Start treatment | Starts the statistical treatment of the raw data with the specified parameters |
Illumina Matrix Treatment
| Legend | Name | Description |
|---|---|---|
| A | Normalization | Options:
|
| B | Matrix transformations | Options:
|
| C | Start Treatment | Starts the statistical treatment of the raw data with the specified parameters |